Delete/Disable Controller Input

When I first installed kodi Krypton my wired xbox 360 controller did not work, I went to input under settings and configured xbox 360 controller and it works in kodi, However right after that I discovered i could download a 3rd party controller software that would allow me to control windows aswell as kodi, But no when I try to use the 360 controller on kodi the game pad sends double signals to kodi, one from the the 3rd party software and one from koid’s controller input so when scrolling with the dpad it skips every other file, I want to disable contro[/size]ller settings on kodi but there is no option, Ive reset kodi, re installed, but the conroller is still now always configured by default. This has me STUMPED. any help would be much appreciated.