Filesystem organization and scrapers

So I’ve got a lot of anime on my NAS I point KODI at.

Problem is it’s having issues with how I have my folder structure.

As a quick (and larger) example, here’s my Gundam folder:

Code:
Gundam
+ AC
++ Wing
+ AD
++ 00
+ CE
++ Seed
++ Seed Destiny
++ Seed HD Remaster
++ Seed Destiny HD Remaster
+ UC
++ 0079
++ Zeta
++ 8th MS Team
++ IGLOO
++ Origin
++ Unicorn
+ Others
++ Turn A
++ Iron Blooded Orphans

Think is, KODI isn’t seeing all of it, and for some reason it’s taking a bunch of seemingly random files within here and categorizing then as Turn A episode 1.

Can I fix this with NFO files, or does every series need to be in its own folder at the root of what you’re pointing KODI at?